Unless, you wear a slate around your neck that says ‘Management quota’ or ‘ general merit’ or ‘comedk’, noone would know nor would anyone bother. After you enter the college, your performance in the college will build up your reputation amongst your peers.
Infact, “management quota guys are not smart” is just a stereotype. Many such students will actually outdo general merit’ students. I am also sure that close to half of general merit students who are freshers and topped KCET wouldn’t know who Linus Torvalds is.
Coming to the college, it’s a very good college. As long as your are committed and passionate about your work, you will find ample opportunities to shine.